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Home » Dessert Recipes » Chocolate Recipes

Mini Pumpkin Chocolate Chip Muffins

Modified: Oct 26, 2022. Published: Oct 26, 2022 by Lindsay Moe.

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Mini pumpkin chocolate chip muffins are the best way to enjoy pumpkin season! Tender muffins are studded with melty chocolate to make an irresistible breakfast, dessert, or snack!

Three Mini Pumpkin Chocolate Chip Muffins on a round white plate in front of a cooling rack full of mini pumpkin chocolate chip muffins.
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Pumpkin and chocolate are a match made in culinary heaven, and there's no better example of that than these adorable mini muffins. These little two-bite muffins are outrageously moist, fluffy, and the perfect addition to your fall baking arsenal. 

You can make this with canned pumpkin, or make your own homemade pumpkin puree from scratch. I love how they keep the chocolate perfectly soft at room temperature. The mini factor means you can eat two… three… maybe lose count and forget about it.

Mini Pumpkin Chocolate Chip Muffins on a cooling rack next to a bowl of chocolate chips.

Ingredients

  • All-purpose flour
  • Granulated sugar
  • Baking soda 
  • Baking powder
  • Salt
  • Eggs
  • Pumpkin puree
  • Unsalted butter
  • Bittersweet chocolate 
  • Semisweet chocolate chips

How to make mini pumpkin chocolate chip muffins

  • In a medium bowl, whisk together flour, sugar, pumpkin pie spice, baking soda, baking powder, and salt. Set aside.
  • Using a stand mixer, combine eggs, pumpkin, and butter. Slowly add the dry ingredients and mix until well combined. Add chopped chocolate and chocolate chips and pulse the mixer a few times to incorporate.
  • Divide batter evenly among muffin cups and bake for 15-20 minutes, or until a toothpick inserted in the center comes out clean.
  • Let the muffins cool in the pan for 5 minutes before removing to a wire rack to cool completely.
Raw Mini Pumpkin Chocolate Chip Muffin batter in a mini muffin tin.

Top tips

Use high quality chocolate

Of course you're welcome to use whatever is available to you, but a high quality chocolate chip and chocolate bar will really take these muffins to the next level.

If you don't have both chocolate bars and chocolate chips on hand you can just use one or the other, but using both makes sure you have the most rich, chocolatey bite every time.

Don't overmix

As with all quick breads, you'll want to mix your batter just until combined. It might still have a few small lumps, but if you overmix the batter the muffins will come out tough and dry.

How to store mini pumpkin chocolate chip muffins

Muffins are best on the day they are made but can be stored in an airtight container for up to 4 days. You can also freeze them in an airtight container for up to 3 months.

Tips for customizing pumpkin chocolate chip muffins

  • Make these full size muffins by dividing them into 12 muffin cups, adjusting the bake time as needed
  • Skip the chocolate or swap it for dried cranberries or chopped nuts
  • Make your own pumpkin puree from scratch
Mini Pumpkin Chocolate Chip Muffins on a cooling rack next to muffin that has been cut in half.

FAQ

Can I use a silicone muffin pan to make pumpkin muffins?

This recipe requires two mini muffin pans. I tested them with one regular and one silicone, and found the regular one to produce a much better muffin.
 
The weight of the muffin batter caused it to sink in the middle, creating lopsided muffins. It probably would have been better if I'd placed it on a baking tray, but this will also affect the way the air moves around the muffins.
 
I recommend sticking with regular mini muffin pans to bake this recipe.

Is pumpkin pie filling the same as pumpkin puree?

This recipe uses pumpkin puree (100% pure pumpkin), NOT pumpkin pie filling. They are not the same, and pumpkin pie filling contains additional ingredients that would cause this recipe to turn out poorly.

Can you freeze mini pumpkin chocolate chip muffins?


Yes, you can freeze mini pumpkin chocolate chip muffins. Place muffins in a zip top freezer bag or other airtight container and freeze for up to 3 months. To thaw let sit at room temperature for a few minutes or microwave for about 30 seconds.

Mini Pumpkin Chocolate Chip Muffins on a cooling rack next to a bowl of chocolate chips.

More muffin recipes

  • Chocolate Chip Muffins
  • Apple Spice Muffins
  • Vegan Chocolate Zucchini Muffins
  • Pistachio Rose Muffins
  • Double Chocolate Banana Muffins
  • Healthier Double Chocolate Mini Muffins
  • Banana Coconut Muffins
  • Zucchini Muffins
  • Carrot Muffins
  • Vegan Pumpkin Muffins

 More pumpkin recipes

  • Pumpkin Puree
  • Vegan Pumpkin Soup
  • Pumpkin Pizza
  • Pumpkin Seed Butter
  • Pumpkin Seed Butter Cups
  • Pumpkin Gingerbread
  • Pumpkin Chocolate Chip Loaf
  • Pumpkin Waffles
  • Pumpkin Chocolate Chip Bars
Mini Pumpkin Chocolate Chip Muffins on a cooling rack next to a bowl of chocolate chips.

If you make this recipe, be sure to rate it, leave a comment, or tag #theliveinkitchen on Instagram!

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Recipe

Three Mini Pumpkin Chocolate Chip Muffins on a round white plate.

Mini Pumpkin Chocolate Chip Muffins

Tender mini pumpkin muffins studded with melty chocolate!
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Prep Time: 20 minutes minutes
Cook Time: 20 minutes minutes
Total Time: 40 minutes minutes
Servings: 48
Calories: 57kcal
Author: Lindsay Moe
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Ingredients

  • 1 ⅔ cups unbleached all-purpose flour
  • 1 cup granulated sugar
  • 1 tablespoon pumpkin pie spice
  • 1 teaspoon baking soda
  • ¼ teaspoon baking powder
  • ¼ teaspoon salt
  • 2 large eggs
  • 1 cup pumpkin puree, (not pumpkin pie filling)
  • 1 stick unsalted butter, melted
  • 3 ounces bittersweet chocolate, chopped
  • ½ cup semisweet chocolate chips

Instructions

  • Preheat the oven to 350ºF. Line 48 mini muffin tins with paper liners.
  • In a medium bowl, whisk together flour, sugar, pumpkin pie spice, baking soda, baking powder, and salt.
  • In the bowl of a stand mixer fitted with the paddle attachment, combine eggs, pumpkin, and butter.
  • Slowly add the dry ingredients and mix until well combined.
  • Add chopped chocolate and chocolate chips and pulse the mixer a few times to incorporate.
  • Divide batter evenly among muffin cups (I like to use a little cookie scoop) and bake 15-20 minutes, or until a toothpick inserted in the center comes out clean.
  • Let the muffins cool in the pan for 5 minutes before removing to a wire rack to cool completely.
  • Muffins are best on the day they are made but can be stored in an airtight container for up to 4 days.

Notes

Slightly adapted from Table For Two

Tips for customizing pumpkin chocolate chip muffins

  • Make these full size muffins by dividing them into 12 muffin cups, adjusting the bake time as needed
  • Skip the chocolate or swap it for dried cranberries or chopped nuts
  • Make your own pumpkin puree from scratch
 

Nutrition

Calories: 57kcal | Carbohydrates: 9g | Fat: 1g | Cholesterol: 7mg | Sodium: 38mg | Potassium: 41mg | Sugar: 5g | Vitamin A: 805IU | Vitamin C: 0.2mg | Calcium: 7mg | Iron: 0.6mg
Tried this recipe?Mention @theliveinkitchen or tag #theliveinkitchen!

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  1. Gillian @ The Haas Machine says

    October 15, 2013 at 7:56 am

    48 muffins in 4 days?! Not THAT'S a challenge I can get behind!

    Reply
    • Lindsay Moe says

      October 16, 2013 at 2:37 pm

      Haha, yes! They're mini so it's not so bad. The recipe can also make just twelve regular sized muffins if you don't want the challenge!

      Reply
      • Julie says

        October 27, 2022 at 10:41 am

        Do you know the bake time for the regular muffins?

        Reply
        • Lindsay Moe says

          October 27, 2022 at 2:04 pm

          Unfortunately I haven't tested it at full size so I can only speculate, I think the bake time would be about the same or a few minutes longer. It's best to keep an eye on them. You'll want the tops to bounce back a little when you press them with your finger, or you can insert a toothpick and it should come out clean (or maybe with a little chocolate) when they're done. If the toothpick has batter on it still, let them cook another couple minutes.

          Reply
  2. tamara says

    October 29, 2013 at 4:27 pm

    Hi! this looks so yummy! I have a question is it ok to use regular all purpose flour? or will it change the taste to much. The reason I am asking is because that's all I have on hand at home

    Reply
    • Lindsay Moe says

      October 29, 2013 at 8:17 pm

      You can absolutely use regular all purpose flour! I prefer unbleached because 1) it isn't bleached and 2) I think it improves the texture of my baked goods. I don't think you would notice a taste difference at all. Enjoy!

      Reply
lindsay moe in a kitchen with glasses on shelves behind her

Hi, I'm Lindsay! I've been creating easily customizable vegetarian recipes since 2011. I love the outdoors, brownies, and brand new books. I live and work in La Crosse, Wisconsin and founded Wild Flour Media to expand on my love for food photography and videography to my community and beyond.

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